About me

My name is Saket Choudhary. I am PhD candidate at the University of Southern California, Los Angeles. I work on developing methods for understanding the role of translational regulation. I also write software to make metadata/data retrieval easier, visualize information, and to streamline mundane bioinformatics tasks.

I have a Masters in Statistics and Computer Science from the University of Southern California and a Masters and Bachelors in Chemical Engineering from the Indian Institute of Technology Bombay, India. A part of this academic journey is documented at scatterred places here, here, and here. Hence, trivially relevant.


Cross-Validated | Google Scholar | CV.

My Projects

  • ribotricer A tool for accurate detection of short and long active ORFs using Ribo-seq data
  • pysradb Python package for interacting with SRAdb and downloading datasets from SRA
  • pyseqlogo Python package to plot sequence logos
  • sklearn-hogsvd Scikit-learn compatible python implementation of HO-GSVD

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