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pysradb: SRA, ENA, and GEO metadata search
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pysradb: SRA, ENA, and GEO metadata search
  • Installation
  • Quickstart
  • CLI
  • Python API
  • MCP server
  • Case Studies
  • Tutorials & Notebooks
    • pysradb notebooks
    • Python API Demo
    • Command-line Download
    • Parallel Download
    • Converting SRA to FASTQ using Conda
    • Selecting Subsets of a Project
    • Querying Multiple Projects
    • Query and Search
    • Extract Identifiers from PMC/DOI
    • Metadata Enrichment with Optional LLM Backends
    • Parse BioScience Search
  • API Documentation
  • Contributing
  • Credits
  • History
  • pysradb
    • pysradb package
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Credits¶

Contributors¶

  • Boshen Yan

  • Maarten van der Sande

  • Dibya Gautam

  • Marius van den Beek

  • Devang Thakkar

Maintainer¶

  • Saket Choudhary <saketkc@gmail.com>

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Copyright © 2023, Saket Choudhary
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